Performance benchmarks
Datasets and commands
Datasets
Dataset |
Description |
---|---|
A |
6 T1w, 3 T2w, 2 PhaseDiff, 4 SE-BOLD (195 volumes / series; total 784), 4 sbref |
B |
2 T1w, 6 PEPolar fieldmaps, 8 SE-BOLD (4274 volumes total) |
fMRIPrep versions and modes
All commands took the form fmriprep sourcedata/raw . participant $OPTIONS
.
The specific options for each version or mode are presented in the following table.
Version / Mode |
Options |
---|---|
23.1.4 |
|
23.2.0a2 / fit |
|
23.2.0a2 / fit + transform |
|
Machine details
Tests were run on a desktop machine running no other significant tests.
Processor: Intel i9-10900 CPU @ 2.80GHz, 20-core
Memory: 64GiB
Storage: PC801 NVMe SK hynix 2TB
OS: Ubuntu 22.04
Environment: Docker images published to https://hub.docker.com/r/nipreps/fmriprep/
Benchmarks
Dataset A
Version / Mode |
Runtime |
Scratch Size |
Scratch Files |
Output Size |
Output files |
---|---|---|---|---|---|
23.1.4 |
2h24m |
54.8GB |
36.8K |
2.30GB |
176 |
23.2.0a2 / fit |
1h35m |
2.91GB |
5.89K |
602MB |
128 |
23.2.0a2 / fit + transform |
1h47m |
19.8GB |
10.0K |
6.37GB |
206 |
Dataset B
Version / Mode |
Runtime |
Scratch Size |
Scratch Files |
Output Size |
Output files |
---|---|---|---|---|---|
23.1.4 |
4h25m |
121GB |
157K |
5.10GB |
286 |
23.2.0a2 / fit |
1h29m |
1.88GB |
12.0K |
543MB |
206 |
23.2.0a2 / fit + transform |
2h7m |
56.5GB |
19.8K |
14.7GB |
348 |